Plant
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-- Oryza sativa Indica Group --
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Summary
Transcript: BGIOSGA009360-TA
Position
2(+):3807933338083540
Family
PF00071
Targets of miRNA
osa-miR166i-3p
,
osa-miR1855
Associated Gene
BGIOSGA009360
Associated AS Events
4
Select a study to display transcript expression levels
[StudyId -- Group number -- Experiment number -- Mean mapped Bases(GB) per experiment] The description of a selected studies
[DRP000453 / 1 / 1 / 8.20GB] Comparison of gene expression pattern between the hybrid and its parents
[DRP000716 / 4 / 15 / 0.26GB] Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
[DRP001148 / 2 / 2 / 2.58GB] Whole genome sequencing of Indica rice cultivars
[DRP004902 / 2 / 5 / 2.02GB] Transcriptome of rice zygotes produced by in vitro fertilization
[DRP006617 / 4 / 12 / 1.82GB] Identification of genes involved in salt removal ability in the fundamental parenchyma cells in rice leaf sheath
[DRP006796 / 2 / 8 / 0.36GB] RNA-seq for shoots of rice F2 plants
[DRP007098 / 2 / 2 / 3.81GB] RNASeq analysis of indica rice
[ERP003982 / 10 / 30 / 1.61GB] Salt stress in salt sensitive Oryza sativa Indica group Pokkali (salt sensitive)
[ERP003983 / 10 / 30 / 1.61GB] Salt stress in salt sensitive Oryza sativa Indica group IR29 (salt sensitive)
[ERP023891 / 4 / 4 / 3.19GB] RNA-seq analyses of most resistance Indica Rice varieties (Oryza sativa L.) leaves tissue under water-deficit condition
[ERP109744 / 3 / 5 / 1.62GB] RNA sequencing of Oryza sativa ssp. indica of inbred and derived epilines
[ERP117230 / 6 / 6 / 7.88GB] Transcriptome sequencing of pigmented and non-pigmented rice grain using Illumina HiSeq 4000 platform.
[SRP008128 / 4 / 4 / 0.47GB] Genome-wide analysis rice transcriptional change during the early stages of false smut formation caused by Ustilaginoidea virens [set A]
[SRP013556 / 1 / 1 / 3.42GB] Transcriptome and methylome interactions in rice hybrids
[SRP013982 / 4 / 4 / 0.33GB] Genome-wide analysis rice transcriptional change during the early stages of false smut formation caused by Ustilaginoidea virens [2011].
[SRP017099 / 4 / 4 / 2.17GB] Rice whole transcriptome differences at two temperature levels surveyed by RNA-Seq
[SRP026160 / 1 / 2 / 6.53GB] Oryza sativa Indica Group strain:PA64s Genome sequencing
[SRP051645 / 1 / 3 / 6.81GB] Oryza sativa Transcriptome or Gene expression
[SRP054997 / 1 / 1 / 18.71GB] Oryza sativa cultivar:Indica cultivars, Naveen and AC41620A Transcriptome or Gene expression
[SRP055765 / 2 / 2 / 5.89GB] Global identification of genes specific for rice meiosis
[SRP060403 / 1 / 1 / 4.61GB] Oryza sativa Indica Group cultivar:RP Bio-226 Transcriptome or Gene expression
[SRP062248 / 3 / 3 / 2.70GB] Variation in the expression of miRNAs and mRNAs in rice (Oryza sativa)
[SRP062323 / 3 / 6 / 6.48GB] Oryza sativa Indica Group cultivar:IR64 Transcriptome or Gene expression
[SRP064943 / 4 / 4 / 2.32GB] Molecular intricacies of Rice-Rhizoctonia solani interactions
[SRP065476 / 9 / 9 / 3.36GB] Genome-wide identification of Drought-responsive Regulatory Coding and Non-coding Transcripts from Oryza sativa L. by deep RNA sequencing
[SRP068995 / 10 / 10 / 0.53GB] Large-scale rewiring of innate immunity circuitry and microRNA regulation during initial rice blast infection [RNA-Seq]
[SRP069214 / 3 / 3 / 0.52GB] Identification of heat stress-responsive rice microRNAs and their target genes by high-throughput sequencing and degradome analysis
[SRP072415 / 2 / 11 / 1.63GB] Oryza sativa Raw sequence reads
[SRP074520 / 2 / 12 / 0.67GB] Oryza sativa Indica Group cultivar:Kuku Belang Transcriptome or Gene expression
[SRP075722 / 4 / 12 / 2.31GB] Transcriptome profiling of resistant NIL (PB1+Pi9) and susceptible rice line (PB1) 24 hours after M oryzae inoculation
[SRP075980 / 5 / 5 / 5.51GB] Dynamics of the transcriptome and methylome during the regeneration of rice
[SRP076892 / 3 / 4 / 3.99GB] Oryza sativa Indica Group Raw sequence reads
[SRP078007 / 1 / 1 / 3.32GB] Oryza sativa Indica Group cultivar:RP Bio-226 Transcriptome or Gene expression
[SRP081221 / 2 / 2 / 4.20GB] Raw sequence reads
[SRP082905 / 2 / 2 / 12.20GB] Oryza sativa Indica Group Transcriptome or Gene expression
[SRP090419 / 18 / 25 / 6.58GB] Gene expression analysis in an indica rice Shuhui498
[SRP095383 / 6 / 15 / 3.40GB] Expression Divergence as an Evolutionary Alternative Mechanism Adopted by Two Rice Subspecies Against Rice Blast Infection
[SRP095635 / 4 / 4 / 2.85GB] Oryza sativa Transcriptome
[SRP097593 / 1 / 1 / 2.40GB] Oryza sativa Indica Group isolate:RP Bio-226 Transcriptome or Gene expression
[SRP099996 / 2 / 6 / 14.06GB] Oryza sativa Indica Group cultivar:DX142 Transcriptome or Gene expression
[SRP101342 / 14 / 28 / 1.07GB] Rice plants exhibiting bacterial blight resistance at high temperature suppress abiotic response
[SRP105357 / 28 / 28 / 15.58GB] Genomic and epigenomic analysis of transgressive segregation in rice
[SRP113286 / 2 / 6 / 5.49GB] RNA-seq data of two half-leaf seedlings under salt treatment and control condition
[SRP113646 / 6 / 18 / 5.87GB] Oryza sativa Raw sequence reads
[SRP117087 / 2 / 2 / 1.70GB] Deep RNAseq indicates protective mechanisms of cold-tolerant indica rice plants during early vegetative stage
[SRP117240 / 2 / 6 / 7.46GB] Transcriptome analysis of a rice pelota mutant Ospelo
[SRP118290 / 3 / 9 / 6.00GB] Transcriptomic analysis of gibberellic acid and paclobutrazol treated rice seedlings under submergence
[SRP127211 / 11 / 22 / 9.24GB] RNA sequencing of Magnaporthe oryzae infection of Oryza sativa indica leaves and roots
[SRP127997 / 3 / 9 / 3.45GB] rice young panicle Raw sequence reads
[SRP131558 / 4 / 4 / 5.12GB] Nitrogen stress transcriptome in rice
[SRP131687 / 2 / 2 / 3.29GB] miR396e-OsGRF7 module controls rice plant architecture (RNA-Seq)
[SRP133966 / 6 / 12 / 1.97GB] Rice domestication-associated miRNA 397 targets laccases to facilitate lignin biosynthesis and yield-related traits [RNA-seq]
[SRP134062 / 4 / 12 / 4.88GB] Transcriptome analysis of rice flag leave on phosphorus withdrawn
[SRP144409 / 3 / 6 / 3.25GB] RNA sequencing of oryza sativa IR64 at Taoyuan
[SRP144984 / 12 / 36 / 4.33GB] OsPRR37 confers an expanded regulation of the diurnal rhythms of the transcriptome and photoperiodic flowering pathways in rice
[SRP151596 / 2 / 6 / 4.30GB] The APETALA2-like transcription factor SUPERNUMERARY BRACT controls rice seed shattering and seed size
[SRP160903 / 2 / 2 / 3.84GB] Comparative transcriptome and translatome analysis in rice revealed differential mRNA translation in Pokkali compared to IR29 under salt stress [Total RNA]
[SRP170091 / 2 / 4 / 4.62GB] RNA-seq of rice seedlings (leaves) under cold stress
[SRP171479 / 3 / 9 / 0.91GB] Oryza sativa Indica Group Transcriptome or Gene expression
[SRP172797 / 4 / 12 / 6.40GB] Oryza Sataiva transcriptome
[SRP174002 / 4 / 35 / 1.10GB] Water impacts nutrient dose responses genome-wide to affect crop production
[SRP174332 / 1 / 1 / 7.53GB] Salinity Tolerance mediated by mutualistic association of an endophyte in a salt-sensitive rice variety - a Transcriptomic approach
[SRP174396 / 1 / 1 / 7.78GB] Oryza sativa strain:- | isolate:- | breed:IR64 | cultivar:indica Transcriptome or Gene expression
[SRP174563 / 6 / 48 / 0.14GB] Transciptomic changes during photosynthetic induction
[SRP178187 / 1 / 3 / 7.06GB] DNA methylation repatterning in nascent segmental rice polyploids
[SRP180082 / 2 / 2 / 4.10GB] Transcriptome profilling of sterile and fertile Oryza salitiva Indica
[SRP183106 / 2 / 6 / 6.15GB] Transcriptome analysis of a rice mutant Osndpk4
[SRP183110 / 2 / 6 / 7.58GB] Inflorescence development in wild and domesticated African and Asian rice
[SRP186638 / 4 / 12 / 8.07GB] Bayogenin 3-O-Cellobioside is a novel anti-blast metabolite produced in rice in response to Pyricularia oryzae infection
[SRP188295 / 2 / 6 / 6.60GB] Oryza sativa Indica Group Transcriptome or Gene expression
[SRP193577 / 3 / 9 / 3.60GB] Oryza sativa Transcriptome or Gene expression
[SRP194531 / 4 / 4 / 5.25GB] Oryza sativa cultivar:indica Transcriptome or Gene expression
[SRP196452 / 3 / 9 / 6.90GB] OsMYB80 regulates anther development and pollen fertility by targeting multiple biological pathways
[SRP198972 / 2 / 2 / 4.42GB] Comparative de novo mRNA transcriptome analysis of Oryza sativa cv. IR-64 under control and fluoride stress
[SRP212308 / 36 / 71 / 6.84GB] Oryza sativa breed:Indica | cultivar:Zhenshan 97, Minghui63, F1 Transcriptome or Gene expression
[SRP213003 / 14 / 14 / 3.47GB] RNA sequencing of oryza sativa 9311 at Taoyuan
[SRP217432 / 2 / 6 / 8.89GB] TQ and nal8 mutant RNA-seq Raw sequence reads
[SRP218377 / 24 / 96 / 1.88GB] Temporal analysis of mRNA from panicle tissue from field grown rice under high nighttime temperatures
[SRP220864 / 5 / 11 / 3.23GB] Oryza sativa Transcriptome or Gene expression
[SRP227426 / 2 / 4 / 2.44GB] Molecular mechanism of high temperature priming treatment leading to tolerance response towards abiotic and biotic stresses in rice
[SRP228427 / 3 / 9 / 6.57GB] Molecular basis of differential resistance in rice line RP2068-18-3-5 against BPH and WBPH through next gene sequencing
[SRP230704 / 4 / 8 / 3.52GB] RNAseq of Oryza sativa
[SRP237766 / 3 / 9 / 8.15GB] Transcriptome sequencing of the callus in subculture 21d of YIL25 versus Teqing, the complementary transgenic line (pCPL) versusTeqing , the overexpressiong transgenic line (pOE) versusTeqing .
[SRP238139 / 2 / 6 / 6.22GB] Oryza sativa Genome sequencing
[SRP250080 / 4 / 7 / 3.73GB] Cold tolerance in rice plants is partially controlled by root responses
[SRP251800 / 7 / 7 / 3.32GB] Mapping the Salt Stress Induced Changes in Root miRNome in Pokkali Rice
[SRP252949 / 4 / 4 / 3.96GB] Gene expression profile of pectin degradation enzymes reveals the molecular events during cell wall degradation and pathogenesis of rice sheath blight pathogen Rhizoctonia solani AG1-IA
[SRP253184 / 8 / 8 / 5.14GB] Genome-wide transcriptome changes under nitrogen (N), water (W) and N+W stress in root and shoot tissues of contrasting rice genotypes, IR 64 and Nagina 22 at seedling stage
[SRP258447 / 8 / 8 / 1.41GB] Differential Gene Expression in Indica rice cultivars during drought stress
[SRP258675 / 4 / 8 / 2.74GB] Long-term transcriptional memory in rice plants submitted to salt shock
[SRP263499 / 12 / 18 / 6.40GB] sl mutant and wild-type sequence
[SRP265874 / 8 / 24 / 6.25GB] Transcriptomic analysis of seed ageing of rice with varied longevity
[SRP269486 / 2 / 6 / 2.63GB] Impact of high temperature and CO2 on rice genotypes
[SRP270845 / 4 / 12 / 5.23GB] Comparative transcriptomics of rice genotypes under nitrogen stress
[SRP277179 / 3 / 3 / 18.87GB] oryza sativa floret development
[SRP277875 / 4 / 12 / 3.69GB] Oryza sativa Raw sequence reads
[SRP278794 / 2 / 4 / 6.46GB] Silencing of an ubiquitin ligase increases grain width and weight in indica rice
[SRP282222 / 2 / 6 / 4.26GB] Oryza sativa Raw sequence reads
[SRP282254 / 1 / 1 / 19.77GB] Resequencing of PA64s, Y58s and GZ63s
[SRP284134 / 8 / 24 / 9.29GB] Parental variation in CG and CHG methylation is associated with allelic-specific expression in elite hybrid rice
[SRP286497 / 16 / 63 / 1.58GB] Temporal analysis of mRNA from leaf tissue in field grown rice
[SRP290155 / 2 / 6 / 1.80GB] RNA-SEQ of rice bundle sheath strand and mesophyll cells
[SRP292916 / 2 / 6 / 2.87GB] RNA-sequencing of Indica rice JBT 36/14 and its nematode resistant mutant line-9
[SRP308277 / 2 / 5 / 2.56GB] Assessing physiological and genetic evidence for weedy rice competitiveness traits at the vegetative growth stage
[SRP311434 / 2 / 8 / 7.12GB] Al tolerance within indice rice
[SRP311838 / 12 / 12 / 5.30GB] Transcriptome analysis of root tips of two contrasting rice genotypes under drought stress
Genome Browser
Transcript functional structure
Associated Alternative Splicing Events
×
Sequence
, osa-miR1855