PlantExp -- Oryza sativa Japonica Group --
Plant Expression Portal
Differential Expression Analysis Job: compare
| Job name |
Thaibonnet_cold10h |
| Consumed time |
00:04:00 |
| Control experiments |
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| Treatment experiments |
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| Differential expression |
Metric: TPM, Read counts per million: 1, Method: DESeq2, FoldChange: 2, Q-Value:0.05
Remove batch effect: |
| Differential splicing |
Metric: PSI(jcec), Splicing read coverage: 10, Method: MATS_LRT, PSI change: 0.05, Q-value: 0.05 |
| GO Enrichment |
Method: Hypergeometry test based on Genome Annotation, P-value: 0.05, Q-value: 0.05 |
| Pathway Enrichment |
Method: Hypergeometry test based on KAAS, Q-value: 0.05 |
| Download Results |
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Experimental cluster based on gene expression levels
Principal component analysis
(Display more clearly in PDF) |
Heatmap analysis
(Display more clearly in PDF) |
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Enrichment analysis for differentially expressed genes
Cellular component, Molecular function, Biological process
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Loading 7684 differential expressed genes
Differentially expressed genes
Experimental cluster based on gene splicing profiles
Principal component analysis
(Display more clearly in PDF) |
Heatmap analysis
(Display more clearly in PDF) |
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Enrichment analysis for differentially spliced genes
Cellular component, Molecular function, Biological process
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Loading 3089 differential splicing AS events
Differential alternative splicing events