PlantExp -- Arabidopsis thaliana --
Plant Expression Portal
Specific Expression Analysis: specificity
  Job name: silique_root_shoot_inflorescence
  Consumed time: 00:10:38
  silique (Group1)
  root (Group2)
  shoot (Group3)
  inflorescence (Group4)
  Differential expression Metric: TPM, Read counts per million: 1, Method: DESeq2, Fold-change:2, P-value=0.05
Batch effect:
  Differential splicing Metric: PSI(jcec), Splicing read coverage: 10, Method: MATS_LRT, PSI changed: 0.05, P-value: 0.05
  GO Enrichment: Method: Enricher.EnsemblGoAnno, P-Value: 0.05, Q-Value: 0.2
  Pathway Enrichment: Method: Enricher.KAAS, P-Value: 0.05, Q-Value: 0.2
  Download Results:
Experimental cluster based on gene expression levels
Principal component analysis
(Display more clearly in PDF) 		Heatmap analysis
(Display more clearly in PDF)
Specifically expressed gene number in groups
Enrichment analysis for specificially expressed genes
No enriched GO terms were found.
GO terms enriched
CC: Cellular component, MF: Molecular function, BP: Biological process
No enriched pathways were found.
Pathways enriched
 
Loading specifically expressed genes

Experimental cluster based on gene splicing profiles
Principal component analysis
(Display more clearly in PDF) 		Heatmap analysis
(Display more clearly in PDF)
Specific splicing event number in groups
Enrichment analysis for specific splicing genes
No enriched GO terms were found.
GO terms enriched
CC: Cellular component, MF: Molecular function, BP: Biological process
No enriched pathways were found.
Pathway enriched
 
Loading differential splicing AS events

Contact: Jinding Liu, liujd(At)njau.edu.cn
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