Species

       Cellular Processes
       Metabolism
       Environmental Information Processing
       Genetic Information Processing
       Organismal Systems

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1. Metabolism

1 . 1 Amino acid metabolism [top]

ko00220 Arginine biosynthesis

ko00250 Alanine, aspartate and glutamate metabolism

ko00260 Glycine, serine and threonine metabolism

ko00270 Cysteine and methionine metabolism

ko00280 Valine, leucine and isoleucine degradation

ko00290 Valine, leucine and isoleucine biosynthesis

ko00300 Lysine biosynthesis

ko00310 Lysine degradation

ko00330 Arginine and proline metabolism

ko00340 Histidine metabolism

ko00350 Tyrosine metabolism

ko00360 Phenylalanine metabolism

ko00380 Tryptophan metabolism

ko00400 Phenylalanine, tyrosine and tryptophan biosynthesis

1 . 2 Biosynthesis of other secondary metabolites [top]

ko00232 Caffeine metabolism

ko00254 Aflatoxin biosynthesis

ko00261 Monobactam biosynthesis

ko00402 Benzoxazinoid biosynthesis

ko00524 Neomycin, kanamycin and gentamicin biosynthesis

ko00901 Indole alkaloid biosynthesis

ko00940 Phenylpropanoid biosynthesis

ko00941 Flavonoid biosynthesis

ko00942 Anthocyanin biosynthesis

ko00943 Isoflavonoid biosynthesis

ko00944 Flavone and flavonol biosynthesis

ko00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis

ko00950 Isoquinoline alkaloid biosynthesis

ko00960 Tropane, piperidine and pyridine alkaloid biosynthesis

ko00965 Betalain biosynthesis

ko00966 Glucosinolate biosynthesis

ko00996 Biosynthesis of various alkaloids

ko00999 Biosynthesis of various plant secondary metabolites

1 . 3 Carbohydrate metabolism [top]

ko00010 Glycolysis / Gluconeogenesis

ko00020 Citrate cycle (TCA cycle)

ko00030 Pentose phosphate pathway

ko00040 Pentose and glucuronate interconversions

ko00051 Fructose and mannose metabolism

ko00052 Galactose metabolism

ko00053 Ascorbate and aldarate metabolism

ko00500 Starch and sucrose metabolism

ko00520 Amino sugar and nucleotide sugar metabolism

ko00562 Inositol phosphate metabolism

ko00620 Pyruvate metabolism

ko00630 Glyoxylate and dicarboxylate metabolism

ko00640 Propanoate metabolism

ko00650 Butanoate metabolism

ko00660 C5-Branched dibasic acid metabolism

1 . 4 Energy metabolism [top]

ko00190 Oxidative phosphorylation

ko00195 Photosynthesis

ko00196 Photosynthesis - antenna proteins

ko00710 Carbon fixation in photosynthetic organisms

ko00910 Nitrogen metabolism

ko00920 Sulfur metabolism

1 . 5 Global and overview maps [top]

ko01200 Carbon metabolism

ko01210 2-Oxocarboxylic acid metabolism

ko01212 Fatty acid metabolism

ko01230 Biosynthesis of amino acids

ko01240 Biosynthesis of cofactors

ko01250 Biosynthesis of nucleotide sugars

1 . 6 Glycan biosynthesis and metabolism [top]

ko00510 N-Glycan biosynthesis

ko00511 Other glycan degradation

ko00513 Various types of N-glycan biosynthesis

ko00514 Other types of O-glycan biosynthesis

ko00515 Mannose type O-glycan biosynthesis

ko00531 Glycosaminoglycan degradation

ko00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis

ko00601 Glycosphingolipid biosynthesis - lacto and neolacto series

ko00603 Glycosphingolipid biosynthesis - globo and isoglobo series

ko00604 Glycosphingolipid biosynthesis - ganglio series

1 . 7 Lipid metabolism [top]

ko00061 Fatty acid biosynthesis

ko00062 Fatty acid elongation

ko00071 Fatty acid degradation

ko00073 Cutin, suberine and wax biosynthesis

ko00100 Steroid biosynthesis

ko00561 Glycerolipid metabolism

ko00564 Glycerophospholipid metabolism

ko00565 Ether lipid metabolism

ko00590 Arachidonic acid metabolism

ko00591 Linoleic acid metabolism

ko00592 alpha-Linolenic acid metabolism

ko00600 Sphingolipid metabolism

ko01040 Biosynthesis of unsaturated fatty acids

1 . 8 Metabolism of cofactors and vitamins [top]

ko00130 Ubiquinone and other terpenoid-quinone biosynthesis

ko00670 One carbon pool by folate

ko00730 Thiamine metabolism

ko00740 Riboflavin metabolism

ko00750 Vitamin B6 metabolism

ko00760 Nicotinate and nicotinamide metabolism

ko00770 Pantothenate and CoA biosynthesis

ko00780 Biotin metabolism

ko00785 Lipoic acid metabolism

ko00790 Folate biosynthesis

ko00860 Porphyrin metabolism

1 . 9 Metabolism of other amino acids [top]

ko00410 beta-Alanine metabolism

ko00430 Taurine and hypotaurine metabolism

ko00440 Phosphonate and phosphinate metabolism

ko00450 Selenocompound metabolism

ko00460 Cyanoamino acid metabolism

ko00470 D-Amino acid metabolism

ko00480 Glutathione metabolism

1 . 10 Metabolism of terpenoids and polyketides [top]

ko00523 Polyketide sugar unit biosynthesis

ko00900 Terpenoid backbone biosynthesis

ko00902 Monoterpenoid biosynthesis

ko00903 Limonene and pinene degradation

ko00904 Diterpenoid biosynthesis

ko00905 Brassinosteroid biosynthesis

ko00906 Carotenoid biosynthesis

ko00908 Zeatin biosynthesis

ko00909 Sesquiterpenoid and triterpenoid biosynthesis

1 . 11 Nucleotide metabolism [top]

ko00230 Purine metabolism

ko00240 Pyrimidine metabolism

2. Genetic Information Processing

2 . 1 Folding, sorting and degradation [top]

ko03018 RNA degradation

ko03050 Proteasome

ko03060 Protein export

ko04120 Ubiquitin mediated proteolysis

ko04122 Sulfur relay system

ko04130 SNARE interactions in vesicular transport

ko04141 Protein processing in endoplasmic reticulum

2 . 2 Replication and repair [top]

ko03030 DNA replication

ko03410 Base excision repair

ko03420 Nucleotide excision repair

ko03430 Mismatch repair

ko03440 Homologous recombination

ko03450 Non-homologous end-joining

2 . 3 Transcription [top]

ko03020 RNA polymerase

ko03022 Basal transcription factors

ko03040 Spliceosome

2 . 4 Translation [top]

ko00970 Aminoacyl-tRNA biosynthesis

ko03008 Ribosome biogenesis in eukaryotes

ko03010 Ribosome

ko03013 Nucleocytoplasmic transport

ko03015 mRNA surveillance pathway

3. Environmental Information Processing

3 . 1 Membrane transport [top]

ko02010 ABC transporters

3 . 2 Signal transduction [top]

ko04016 MAPK signaling pathway - plant

ko04070 Phosphatidylinositol signaling system

ko04075 Plant hormone signal transduction

4. Cellular Processes

4 . 1 Transport and catabolism [top]

ko04136 Autophagy - other

ko04144 Endocytosis

ko04145 Phagosome

ko04146 Peroxisome

5. Organismal Systems

5 . 1 Environmental adaptation [top]

ko04626 Plant-pathogen interaction

ko04712 Circadian rhythm - plant

Contact: Jinding Liu, biotec(At)njau.edu.cn
©Yam Research Group in Nanjing Agricultural University