TMKingdom
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TMK
Query by ID or term
Query by sequence
Phylogeny analysis
Summary of domain
Summary of TM num
TMKome
Browsing by lineage
Comparison analysis
Protein-interaction
Annotation server
Summary of TMKome
Cluster
Query by ID
Query by structure
Summary of cluster
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Help
Search TMKs by 3D structure
Provide a PDB file
or enter a uniprot ID
Alignment type
3Di+AA
TM alignment
3di alignment
Sensitivity
sensitiver
sensitive
fast
faster
E-value
1e-50
1e-20
1e-10
1e-5
1e-3
1e-2
1e-1
1
Coverage mode
coverage of query & target
coverage of target
coverage of query
Coverage
90%
70%
50%
30%
10%
max-seqs
10
20
50
100
1000
Hit TMK list
(example)
(Click TMK ID to show details)
Contact: Jinding Liu, biotec(At)njau.edu.cn
©Bioinformatics Center and Plant Phytophthora Interaction Laboratory, Nanjing Agricultural University