Phylogenetic tree
Explore the evolutionary relationships of the CAP family members in phylogenetic tree
Explore the evolutionary relationships of the CAP family members in phylogenetic tree
Family: CAP
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Description:
Cysteine-rich secretory protein family (CAP) is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 protein. This is an RLK family with an uncommon extracellular domain. The hidden Markov model (HMM) PF00188 was used for the CAP classification.
References:
1. New knowledge from old: in silico discovery of novel protein domains in Streptomyces coelicolor. Yeats C, Bentley S, Bateman A. BMC Microbiol. 3, 3, (2003). PMID: 12625841.
2. Isolation and characterization of a cone snail protease with homology to CRISP proteins of the pathogenesis-related protein superfamily. Milne TJ, Abbenante G, Tyndall JD, Halliday J, Lewis RJ. J. Biol. Chem. 278, 31105-10, (2003). PMID: 12759345.
3. The CAP superfamily: cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins--roles in reproduction, cancer, and immune defense. Gibbs GM, Roelants K, O'Bryan MK. Endocr. Rev. 29, 865-97, (2008). PMID: 18824526.
4. NMR solution structure of the pathogenesis-related protein P14a. Fernandez C, Szyperski T, Bruyere T, Ramage P, Mosinger E, Wuthrich K. J. Mol. Biol. 266, 576-93, (1997). PMID: 9067611.
List of CAP in RLKomes
CAP in Arabidopsis thaliana (3702.GCA_000001735.1)
Genetic map for RLKs in reference sequences with length > 1MB
No linkage map is available.
Protein sequence length distribution of CAP family
Summary of function domain topology distribution for CAP family
Domain topology percentage
Domain word cloud
Spatial structure
