Family: GH18
Switch to other families
Species |
|
Genus | |
Family | |
Order | |
Class | |
Phylum |
Description:
Glycoside hydrolase family 18 (GH18) is a type of plant chitinase. This is an RLK family with uncommon extracellular domain. The hidden Markov model (HMM) PF00704 was used for the GH18 classification.
References:
1.Structures and mechanisms of glycosyl hydrolases. Davies G, Henrissat B. Structure 3, 853-9, (1995). PMID: 8535779.
2.Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases. Henrissat B, Callebaut I, Fabrega S, Lehn P, Mornon JP, Davies G. Proc. Natl. Acad. Sci. U.S.A. 92, 7090-4, (1995). PMID: 7624375.
3.Chitinase-like proteins in lung injury, repair, and metastasis. Lee CG, Dela Cruz CS, Ma B, Ahangari F, Zhou Y, Halaban R, Sznol M, Elias JA. Proc Am Thorac Soc 9, 57-61, (2012). PMID: 22550243.
4.Structure of chitinase D from Serratia proteamaculans reveals the structural basis of its dual action of hydrolysis and transglycosylation. Madhuprakash J, Singh A, Kumar S, Sinha M, Kaur P, Sharma S, Podile AR, Singh TP. Int J Biochem Mol Biol 4, 166-78, (2013). PMID: 24380021.
5.High resolution crystal structure of the endo-N-Acetyl-a-D-glucosaminidase responsible for the deglycosylation of Hypocrea jecorina cellulases. Stals I, Karkehabadi S, Kim S, Ward M, Van Landschoot A, Devreese B, Sandgren M. PLoS ONE 7, e40854, (2012). PMID: 22859955.
6.Human YKL-39 is a pseudo-chitinase with retained chitooligosaccharide-binding properties. Schimpl M, Rush CL, Betou M, Eggleston IM, Recklies AD, van Aalten DM. Biochem. J. 446, 149-57, (2012). PMID: 22742450.
List of GH18 in RLKomes
GH18 in Arabidopsis thaliana (3702.GCA_000001735.1)
Genetic map for RLKs in reference sequences with length > 1MB
No linkage map is available.
Protein sequence length distribution of GH18 family
Summary of function domain topology distribution for GH18 family
Domain topology percentage
Domain word cloud
Spatial structure